BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A08LP1|AL430640
(953 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig433 1405 0.0
>3x_Contig433
Length = 1879
Score = 1405 bits (709), Expect = 0.0
Identities = 760/771 (98%), Gaps = 7/771 (0%)
Strand = Plus / Plus
Query: 1 gatcagtcattagaaaggtgagtagatgattcaatgatggacaaggtattgtaacttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 gatcagtcattagaaaggtgagtagatgattcaatgatggacaaggtattgtaacttttc 1169
Query: 61 atctgt-ctaatatgcggcttcgcatttgacgacattgtatcgtagcaaccaaaaagggg 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 atctgtgctaatatgcggcttcgcatttgacgacattgtatcgtagcaaccaaaaagggg 1229
Query: 120 agagacaatttatggtgaagaacaatgtcagattagtttacaaaacctagttcacaataa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 agagacaatttatggtgaagaacaatgtcagattagtttacaaaacctagttcacaataa 1289
Query: 180 atcatgtttataacaggcgcaagatcaacgtaagaaaagaagattgtagcacgaattatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 atcatgtttataacaggcgcaagatcaacgtaagaaaagaagattgtagcacgaattatt 1349
Query: 240 gaggtagtttttgggagtaatgagaaaa-ttctgtatcgttgttt---tgtttgggaaga 295
|||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 1350 gaggtagtttttgggagtaatgagaaaagttctgtatcgttgtgtgtgtgtttgggaaga 1409
Query: 296 aattaaaacgcaggtaatccgtaatggcaggcatcagtaaccagataatgttctcggcat 355
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 aatttaaatgcaggtaatccgtaatggcaggcatcagtaaccagataatgttctcggcat 1469
Query: 356 tgagaataagcatcaacgaagtctcatggagagagagagaatgagaagtcacagatgaac 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 tgagaataagcatcaacgaagtctcatggagagagagagaatgagaagtcacagatgaac 1529
Query: 416 attcatgttttaaaaccgaaaaaaacagttatctgaatagaaaccataccgtgaatgaaa 475
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1530 attcatgttttaaaaccgataaaaacagttatctgaatagaaaccataccgtgaatgaaa 1589
Query: 476 tgaataaaaaa-cacttgtatctaaaaggtgtttttttatgattttggtactttaatatt 534
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1590 tgaataaaaaatcacttgtatctaaaaggtgtttttttatgattttggtactttaatatt 1649
Query: 535 gattggtggaaaatagcagatgcactatacaaatagtatcatcttgtgaaccttatagca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1650 gattggtggaaaatagcagatgcactatacaaatagtatcatcttgtgaaccttatagca 1709
Query: 595 taatattgtgaaagggcagtttataggaatatagttgtctttcgaaaagggaagagtaga 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1710 taatattgtgaaagggcagtttataggaatatagttgtctttcgaaaagggaagagtaga 1769
Query: 655 gagatgggaataaaaaaaaggataaacgcaaagaagttaactttaacgttcaattaccta 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1770 gagatgggaataaaaaaaaggataaacgcaaagaagttaactttaacgttcaattaccta 1829
Query: 715 attcgttcttgctctaatctctgaaagcaaagctcttcttagcaaaatccc 765
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1830 attcgttcttgctctaatctctgaaagcaaagctcttctta-caaaatccc 1879
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8100
Number of Sequences: 1807
Number of extensions: 8100
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)